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"Perkembangan terkini dari perangkat pencitraan medik computerized tomography (CT) scan telah memungkinkan dihasilkannya citra dari penampang melintang secara multi irisan dalam orde beberapa detik. Citra medik digital yang dihasilkan merepresentasikan penampang melintang dari berbagai struktur jaringan dari irisan yang dicitrakan. Salah satu tantangan yang dapat membantu dalam proses diagnosis berbasis citra adalah ekstraksi informasi dari struktur anatomi tertentu dengan suatu metode segmentasi citra serta visualisasi volumetrik dengan bantuan komputer. Untuk kasus visualisasi volumetrik tulang pelvis pada citra CT-scan multi irisan, seluruh citra yang mengandung bagian struktur tulang pelvis harus disegmentasi. Pada penelitian ini, satu teknik segmentasi citra berbasis active contour akan diimplementasikan untuk melakukan segmentasi citra multi irisan secara semi otomatis. Proses segmentasi citra diawalidengan menentukan model kurva 2D yang dilakukan secara manual pada citra irisan pertama. Kemudian model kurva tersebut secara iterasi akan berdeformasi sampai dengan bentuk kurva yang berhimpit pada batas tepian citra tulang pelvis. Hari akhir kurva 2D pada irisan pertama akan digunakan sebagai inisialisasi model kurva 2D pada proses segmentasi citra irisan berikutnya. Proses tersebut akan berlanjut sampai dengan citra irisan terakhir. Metode segmentasi citra berbasis active contour akan dibandingkan dengan metode segmentasi secara nilai ambang dari homogenitas distribusi intensitas dan metode segmentasi secara manual. Analisis secara kualitatif terhadap hasil segmentasi tiap irisan dan analisis kualitatif pada representasi visualisasi volumetrik digunakan pada penelitian ini.

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AbstractThe current development of computerized tomography (CT) has enable us to obtain cross sectional image using multi slicing techniques in an order of few seconds. The obtained images represent several tissue structures on cross section slice being imaged. One challenge to help diagnosis using CT images is extracting an anatomic structure of interest using a method of image segmentation and volumetric visualization with the assistance of computers. In case of volumetricvisualization of pelvis bones extracted from multi-slice CT images, whole images which are containing part of pelvis bone structures must be segmented. In this research, an image segmentation technique based on active contour is implemented for semi-automatic multi slice image segmentation. Image segmentation steps are initialized with a define model of 2D curve on the first slice image manually. Next, its model curve is deformed to reach the final result of 2D curve that fits to boundary edges of pelvis bone image. The final result of 2D curve on previous slice image was used as an initialization model of 2D curve on the next slice images. This process will continue until the final slice image. This segmentation method was compared with the segmentation method based on threshold from homogenous intensitydistribution and manual segmentation method. Quantitative analysis from the results of segmentation on each slice and qualitative analysis on the representation of volumetric visualization are performed in this research."

"Penelitian ini menerapkan dan menganalisa teknik pengolahan citra untuk deteksi kanker paru-paru. Teknik pengolahan citra banyak digunakan di beberapa masalah medis untuk perbaikan citra dalam deteksi fase dan pengobatan dini. Penelitian ini mengusulkan metode deteksi kanker paru-paru berbasis segmentasi citra. Segmentasi citra adalah salah satu pengolahan tingkat menengah dalam pengolahan citra. Pendekatan wilayah dan watershed digunakan untuk proses segmentasi citra CT scan. Fase deteksi yaitu peningkatan kualitas citra menggunakan filter Gabor, segmentasi citra, dan ekstraksi fitur dengan binerisasi. Dari hasil percobaan, ditemukan efektivitas dari pendekatan tersebut. Fitur utama untuk mendeteksi kanker adalah dengan menggunakan perbandingan yang dilakukan dengan persentase piksel dan penanda citra.

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In this undergraduate thesis, we implement and analyze the image processing method for detection of lung cancer. Image processing techniques are widely used in several medical problems for repairs picture in the phase detection and early treatment. This research proposed a detection method of lung cancer using image segmentation. Image segmentation is one of intermediate level processing in image processing. Marker control and watershed approach are used to segment of CT scan image. Detection phases are followed by image enhancement using Gabor filter, image segmentation, and features extraction with binarization. From the experimental results, we found the effectiveness of our approach. The main detected features for accurate images comparison are mask labeling with high accuracy and robust."

"Penyakit mata berat yang telat tertangani seperti katarak, glaukoma, serta retinopati diabetik merupakan salah satu penyebab utama gangguan penglihatan dan kebutaan. Pencegahan dapat dilakukan dengan melakukan pendektesian dini melalui citra fundus. Untuk mengatasi minimnya dokter mata dan persebarannya yang masih belum merata, dilakukan pendektesian penyakit mata secara otomatis melalui gambar mata dengan pendekatan deep learning. Dalam penelitian ini, digunakan metode Transfer Learning U-Net dengan VGG16 sebagai pretrained model (V-Unet) yang telah dilatih pada online database, ImageNet. Data yang digunakan dalam penelitian ini merupakan data citra fundus yang diperoleh dari platform Kaggle. Preprocessing data pada citra fundus yang dilakukan untuk meningkatkan kinerja model adalah centered crop, resize, dan rescale. Fungsi optimasi Adam digunakan untuk meminimalkan fungsi loss ketika melatih model. Pada penelitian ini, dilakukan pemisahan data training, validasi, testing dengan 3 rasio berbeda, yaitu kasus I dengan rasio 60:20:20, kasus II dengan rasio 70:20:10, dan kasus III dengan rasio 80:10:10. Hasil penelitian ini menunjukkan bahwa V-Unet memiliki kinerja paling baik pada kasus II berdasarkan skor AUC dan running time dengan nilai rata-rata skor AUC 0,8622 dan rata-rata running time 3,7079 detik sedangkan berdasarkan nilai akurasinya V-Unet memiliki kinerja paling baik pada kasus III dengan rata-rata nilai akurasi sebesar 66,34%.

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Untreated severe eye diseases such as cataracts, glaucoma, and diabetic retinopathy is one of the main causes of visual impairment and blindness. Prevention can be done by doing early detection through fundus images. To overcome the lack of ophthalmologists and their uneven distribution, an automatic detection of eye diseases is carried out through eye images using a deep learning approach. In this study, Transfer Learning U-Net method was used with VGG16 as a pre-trained model (V-Unet) which had been trained on the online database, ImageNet . The data used in this study is fundus image data that obtained from the Kaggle platform. Preprocessing data on the fundus image that is carried out to improve model performance is centered crop, resize, and rescale. Adam's optimization function used to minimize the loss function when training the model. In this study, the training, validation, testing data was separated with 3 different ratios, namely case I with a ratio of 60:20:20, case II with a ratio of 70:20:10, and case III with a ratio of 80:10:10. The results of this study indicate that V-Unet has the best performance in case II based on the AUC score and running time with an average AUC score of 0.8622 and an average running time of 3.7079 seconds while based on accuracy value the best case is case III with an average accuracy value of 66.34%."

"This book constitutes the refereed proceedings of the Second International Workshop on Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data, STIA 2012, held in conjunction with MICCAI 2012 in Nice, France, in October 2012. The 13 papers presented in this volume were carefully reviewed and selected from 22 submissions. They are organized in topical sections named, longitudinal registration and transport, spatio-temporal analysis for shapes, spatio-temporal analysis under appearance changes, and spatio-temporal analysis for biology."

"Coronavirus Disease 2019 (COVID-19) merupakan sebuah penyakit yang disebabkan oleh novel coronavirus SARS-CoV-2. Penyakit yang berasal dari Provinsi Hubei di China ini sudah menyebar ke seluruh dunia, menjangkiti banyak hingga seluruh negara di dunia. Sudah menginfeksi kurang lebih 400 juta jiwa di seluruh dunia pada pertengahan kuartal pertama tahun 2022. Mencegah penyebaran COVID-19 merupakan tindakan yang harus segera dilakukan, salah satu caranya adalah dengan pendeteksian sedini mungkin.Pendeteksian COVID-19 selain menggunakan metode kedokteran, dapat dipertimbangkan mengenai penggunaan artificial intelligence. Penelitian mengenai metode pendeteksian COVID-19 menggunakan citra X-Ray yang telah dilakukan oleh Dhita menuai hasil yang cukup sukses. Menambahkan penelitian tersebut, kami melakukan metode pendeteksian menggunakan citra CT Scan. Beberapa penelitian mengenai pendeteksian COVID-19 menggunakan citra CT Scan seperti Tang et al. meneliti mengenai segmentasi citra CT Scan terhadap daerah local lesi terindikasi COVID-19 atau Pneumonia. Rahimzadeh, Attar, and S. M. Sakhaei juga melakukan penelitian sebelumnya mengenai pengklasifikasian pasien COVID-19 menggunakan citra CT Scan dengan mendapatkan hasil 90% akurasi dengan menggunakan metode FPN.

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Coronavirus Disease 2019 (COVID-19) is a disease caused by the novel coronavirus SARS-CoV-2. This disease which originates from the Hubei Province in China has already spread throughout the world, reaching many if not all countries in the world. There have been more than 400 million people infected across the globe as of the first quarter of 2022. Prevention of the spreading of the disease is very important, and one of the best ways to do so is to detect its infection as soon as possible.

Aside from asking a doctor, the task of detecting COVID-19 using artificial intelligence has been considered. The research done by Dhita to detect COVID-19 using X-ray images has been seen as a success. Adding to that, we attempt to detect COVID-19 using CT Scan images.

A couple research papers about detecting COVID-19 using CT Scan images such as the ones done by Tang et al. tried to segment CT Scan images related to the lesions that indicate COVID-19 or Pneumonia. Rahimzadeh, Attar, and S. M. Sakhaei also conducted research related to classifying COVID-19 patients using CT Scan images and found success at 90% accuracy with an FPN model."

"Coronavirus Disease 2019 (COVID-19) merupakan sebuah penyakit yang disebabkan oleh novel coronavirus SARS-CoV-2. Penyakit yang berasal dari Provinsi Hubei di China ini sudah menyebar ke seluruh dunia, menjangkiti banyak hingga seluruh negara di dunia. Sudah menginfeksi kurang lebih 400 juta jiwa di seluruh dunia pada pertengahan kuartal pertama tahun 2022. Mencegah penyebaran COVID-19 merupakan tindakan yang harus segera dilakukan, salah satu caranya adalah dengan pendeteksian sedini mungkin. Pendeteksian COVID-19 selain menggunakan metode kedokteran, dapat dipertimbangkan mengenai penggunaan artificial intelligence. Penelitian mengenai metode pendeteksian COVID-19 menggunakan citra X-Ray yang telah dilakukan oleh Dhita menuai hasil yang cukup sukses. Menambahkan penelitian tersebut, kami melakukan metode pendeteksian menggunakan citra CT Scan. Beberapa penelitian mengenai pendeteksian COVID-19 menggunakan citra CT Scan seperti Tang et al. meneliti mengenai segmentasi citra CT Scan terhadap daerah local lesi terindikasi COVID-19 atau Pneumonia. Rahimzadeh, Attar, and S. M. Sakhaei juga melakukan penelitian sebelumnya mengenai pengklasifikasian pasien COVID-19 menggunakan citra CT Scan dengan mendapatkan hasil 90% akurasi dengan menggunakan metode FPN.

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Coronavirus Disease 2019 (COVID-19) is a disease caused by the novel coronavirus SARS-CoV-2. This disease which originates from the Hubei Province in China has already spread throughout the world, reaching many if not all countries in the world. There have been more than 400 million people infected across the globe as of the first quarter of 2022. Prevention of the spreading of the disease is very important, and one of the best ways to do so is to detect its infection as soon as possible. Aside from asking a doctor, the task of detecting COVID-19 using artificial intelligence has been considered. The research done by Dhita to detect COVID-19 using X-ray images has been seen as a success. Adding to that, we attempt to detect COVID-19 using CT Scan images. A couple research papers about detecting COVID-19 using CT Scan images such as the ones done by Tang et al. tried to segment CT Scan images related to the lesions that indicate COVID-19 or Pneumonia. Rahimzadeh, Attar, and S. M. Sakhaei also conducted research related to classifying COVID-19 patients using CT Scan images and found success at 90% accuracy with an FPN model."

"This book constitutes the refereed proceedings of the International Workshop on Mesh Processing in Medical Image Analysis, MeshMed 2012, held in Nice, France, in October 2012 in conjunction with MICCAI 2012, the 15th International Conference on Medical Image Computing and Computer Assisted Intervention. The book includes 16 submissions, 8 were selected for presentation along with the 3 plenary talks representative of the meshing, and 8 were selected for poster presentations. The papers cover a broad range of topics, including statistical shape analysis and atlas construction, novel meshing approaches, soft tissue simulation, quad dominant meshing and mesh based shape descriptors. The described techniques were applied to a variety of medical data including cortical bones, ear canals, cerebral aneurysms and vascular structures."

"This book constitutes the refereed proceedings of the 5th International Workshop on Biomedical Image Registration, WBIR 2012, held in Nashville, Tennessee, USA, in July 2012. The 20 full papers and 11 poster papers included in this volume were carefully reviewed and selected from 44 submitted papers. They full papers are organized in the following topical sections, multiple image sets, brain, non-rigid anatomy, and frameworks and similarity measures."